S+RJ10 should do the job with 100M. As there are some strange things going on I would stay with MT modules as it is more likely MT will make them work in their switches. This switches imho are still beta stuff so intensive lab testing is required before using them. They work but not under all conditions.
It seemed very strange to me that the values of the 10GB modules are displayed correctly in the SFP tab in the interface including temperature and supply voltage, and not in the MT 1G modules from MT.
Now I understand why.
However, I find the temperature of the 10g modules with around 65°c is quite high, which is why I wanted to use the 1g modules. All in the expectation that they won't get too hot.
I believe all of them are the same. Actually all FS.COM SFP modules are the same. I even ordered F5 compatible ones and still got generic ones because they just work, also in F5. The only difference are vendor strings encoded in SFP header but considering that MikroTik most likely doesn't give a damn about those I think literally all of FS.COM modules should work properly in MikroTik. In generic modules description there's even explicit note about MikroTik compatibility. Though I'll need to check whether they can operate at 10/100 speed as I only tested gigabit.
I ordered corresponding 10/100/1000 modules from FS.com. Now it remains exciting whether these are up to the job.
Fortunately I got the CRS317 for the use in the basement, to realize the floor distribution over 1G switches, except for a few exceptions which are directly connected (VoIP System which unfortunately only supports 100m full duplex etc.).